Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VGGLMKKNTLILGIESSCDETAASVVKNGNEIISSVVASQIESHKRFGGVVPEIASRHHVEQITLVIEEALKQANVTMDDLDGVAVTEGPGLVGALLIGVNAAKTLAFMHNLPLVGVHHIAGHIYANRFETEFKFPLLSLVVSGGHTELVLMKADNEFEIIGETRDDAAGEAYDKVARTLGLAYPGGVQIDKLAKDGEDTFHFPRAMMDEGSFDFSFSGLKSSFINTLHNLRQRGEEPNPNDMAASFQASVVDVLVSKTIRAAKQYDVKQLLLAGGVAANQGLRERLIQEVKLELPETELIIPPLALCGDNAAMIAAAGTVSFLQGKRSGFDMNANPGLLLEDI |
2IVN Chain:A ((2-301)) | ---------LALGIEGTAHTLGIGIVSE-DKVLANVFDT-LTTEK--GGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGPGLGPALRVVATAARALAVKYRKPIVGVNHCIAHVEITKM-FGVKDP-VGLYVSGGNTQVLALEG-GRYRVFGETLDIGIGNAIDVFARELGLGFPGGPKVEKLAEKGEKYIELPYAVK---GMDLSFSGLLTEAIRKYRSGKYRVE-----DLAYSFQETAFAALVEVTERAVAHTEKDEVVLVGGVAANNRLREML--RIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKAG------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205353 for 2747 contacts (-74.8/contact) +
2D Compatibility (PS) -32341 + (NN) -11438 + (LL) 1220
1D Compatibility (HY) -20800 + (ID) 5550
Total energy: -274262.0 ( -99.84 by residue)
QMean score : 0.495
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