Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEKKIDFKKEEKKFYAPKRKPERIFVPEMNFLMVDGKGDPDGEEYQKAVQSLYAIAYTIKMSKMGETRLNGYADFVVPPLEGFWWS-E-EKFDLKDRDAWLWTSILRQPDFVTEEVLEWAKEVAQKKKPDVDTSRVKLVRFEEGECVQMMHIGPFSEEVKTVAELHQFMETEGLHNDTGAVRKHHEIYLSDPRKADPEKMKTILRLPVS
3B49 Chain:A ((8-211))
----KIDFKKEEKKFYAPKRKPERIFVPEMNFLMVDGKGDPDGEEYQKAVQSLYAIAYTIKMSKMGETRLDGYSDFVVPPLEGFWWSEGKFD--LKDRDAWLWTSILRQPDFVTEEVLEWAKEVARKKKPDVDTSRVKLVRFEEGECVQMMHVGPFSEEVHTVAEMHQFMETEGLRNDTGAIRKHHEIYLSDPRKANPEKMKTILRLPVS
General information:
TITO was launched using:
RESULT:
Template:
3B49.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54227 for 1494 contacts (-36.3/contact) +
2D Compatibility (PS) -21902 + (NN) -11932 + (LL) 484
1D Compatibility (HY) -27200 + (ID) 9500
Total energy: -124277.0 ( -83.18 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_3B49.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B49-query.scw
PDB file :
Tito_Scwrl_3B49.pdb
: