Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVKNTIKWIAIGFAGIILLPLLIVFFIYKKAVGKKDYNPEVLENLDKASQEFVKNTSPLSDVDSRYKYMRLATKALPSAKDIEIGDVENKKIDGPAGKIPIRIYTPQEDGPFEIIVYYHGGGFVLGGLQTHDAIARKLVQTTGARVVTVDYRLAPENPFPAAVEDAYAALLWVQNHRTSLRAKSSDIIVAGDSVGGNLATVVTQIAKSKGKPNITAQILLYPATDIFSRDASVLYPSMDEFAEGYVLTKESLDKFFKLYI---ANASDRKYDPLVAPIRSKDLVGLPKTFIATAEFDPLRDQGEAYAKKLKDAGVEVFAKRFEKVPHGFMTTNSEATDETYELISEFLEEK
3AIK Chain:A ((61-297))---------------------------------------------------------------------------------EVGKIEDITIPGSETNIKARVYYPKTQGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSEKFNGKYG-IAVGGDSAGGNLAA-VTAILSKKENIKLKYQVLIYPAVSF-----DLITKSLYDNGEGFFLTREHIDWFGQQYLRSFADLLDFRFSPILA-----DLNDLPPALIITAEHDPLRDQGEAYANKLLQSGVQVTSVRFNNVIHGFVS--------------------


General information:
TITO was launched using:
RESULT:

Template: 3AIK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129539 for 2091 contacts (-62.0/contact) +
2D Compatibility (PS) -25462 + (NN) -14247 + (LL) 8356
1D Compatibility (HY) -21200 + (ID) 5350
Total energy: -187442.0 ( -89.64 by residue)
QMean score : 0.591

(partial model without unconserved sides chains):
PDB file : Tito_3AIK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AIK-query.scw
PDB file : Tito_Scwrl_3AIK.pdb: