Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VTLELHNVTKKFGTKVAVNDLSFRVEPGKILGLIGQNGAGKTTTFRLILHFLEATSGKITWDGKEVSKIDPNI-----IGYLPEERGLYPNVTIEEQLIFFAELKG-YPKQKIKAEIDSWLERAEIVGKKTDLIKTLSKGNQQKIQLLSTIIHQPKLVILDEPFSGLDPVNAEILKKFVFDLRASGAAIIFSSHRMENVEELCDSLLMLKKGNVVLQGT------TESVKSVFGRKRILIESSHSAAELATLPGVLNVQTHRDGVLQLEIAHESDAEKIFDYVTKDGFIQTFSLQAPTLEEIFKWKAGELNE |
| 4P33 Chain:A ((2-233)) | -TLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDQPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEHVKRVY------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143005 for 1743 contacts (-82.0/contact) +
2D Compatibility (PS) -23506 + (NN) -3806 + (LL) 6236
1D Compatibility (HY) -20400 + (ID) 3050
Total energy: -187531.0 ( -107.59 by residue)
QMean score : 0.620
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