Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LVEQLVSNAAILLAGFYIISLVYKEPITKELSTNKKIVIGIWAGLLGFALMVFGIPISNNVIVDLRHIPIIMVGFYGGPIPAIVSAIIISASRFLLSVNSAAIMAAVVMMLIGIITAIFGKRIEKFKIWGVFILNIIACSFVVINLHLILARESHFWINMTVFVLIALVIGAVSAGLMSNMIKSKQLFQKYEQDSTLDYLTKLSNVRQFDEKINHVMDAGSR---QVTLMLIDIDYFKNINDTYGHDAGDAILKQLAIILKRNTSDGSE-AFRNGGEEFSIVLLDCPIEKGNFFAEQVRRETE----EYDFMIPSGQVVKITISVGVSS--SKDGANTSEGLFKSADEALYKAKLTGRNQVCIADGN |
3I5C Chain:A ((33-195)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGLTGLSNRRHFDEYLEMEWRRSLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCSRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDQPRPGSH---LTVSIGVSTLVPGGGGQTFRVLIEMADQALYQAKNNGRNQVGL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66616 for 1208 contacts (-55.1/contact) +
2D Compatibility (PS) -17045 + (NN) -8934 + (LL) 19760
1D Compatibility (HY) -7600 + (ID) 3450
Total energy: -83885.0 ( -69.44 by residue)
QMean score : 0.529
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