Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKVDSLSKKIDGKLL-LDKITFEVKPGEIIGIVGRNGVGKTTLFRTIMGFYIPDAGDVYLDEPL-SKNHQL-----KQKLFMLQDNLNCWDGYKIPTIKKFYQKTYPL----FDGDKFDNLMKQVNLAKDVKF------QNYSKGMKGLFGLVLALSIGAEFILLDEPMEGLDIIAQKKIMGILLEEVEKRKLGI--IISSHRLADLDPIADYIHILQDNHIEESYHLESLREQAVKIQIAFENKKIPHFLLENGKVINKYGRVYTILFRDMNTELYAAIKKEKPIFMDELAVTLEDLFIYHLEEQGGEKL |
| 1OXT Chain:A ((16-238)) | -----------GKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMV---FQTWALY--PNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARA-LVKEVQSR-LGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVA---------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OXT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110481 for 1503 contacts (-73.5/contact) +
2D Compatibility (PS) -22103 + (NN) -9414 + (LL) 6988
1D Compatibility (HY) -15200 + (ID) 3300
Total energy: -153510.0 ( -102.14 by residue)
QMean score : 0.489
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