Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFQLKANGTDVKTEVISGFTTFLTMVYIVVVNPAILSAAGVPFNTVFMATIISAVIGTLWMAIF-A-NYPIAIAPGLGMNAYFVTVVTTQKLDYSVAFAAVFVAGIIFLLLSLT----PLREKIIEAIPHNLKAGITAGIGLFIAFLGFRMTGIIVSNDSNLVGLGDLHSKEAILAIVGLLITLILLAL--N---VKGALFIGMIATGIIAFITGELKFT----DGIVKLPPMPEFVFTNPIHAFGDVMSYGLYAVVLSFLLITIFDTTGTMIGVAKKAGLMKGESLPNAKQALMADAVATSVGSMFGTTPTSAY-IESSAGVATGGRTGLTTLTVAILFMVSAF---FAPLVGAVSGISAITAPALI-------VVGSMMIGAVKEIDWDT-LDEAFPAFLVILAMP-----LTSSIAIGLAFGFISYPVLKVFTGKWRELNWFLIVIAVLFFILVAFLPH |
3QE7 Chain:A ((5-410)) | AIGVSERPPL-LQTIPLSLQHLFAMFGATVLVPVLFH---IN----PATVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLL-L--LPLGYEVALGGFIMCGVLFCLVSFIVKKAGTG-WLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAE------GQTPDSKTIIISITTLAVTVLGSVLFRGFLAIIPI-LIGVLVGYALSFAMGIVDTTPIINAHWFALPTLYT------P-RF----EWFAILTILPAALVVIAEHVGHLVVTANIVKKD-LLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIP--LPVMGGVSLLLYGVIGASGIRVLIESK-VDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGMALATIVGIGLSLIFKLIS---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QE7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -338286 for 3105 contacts (-108.9/contact) +
2D Compatibility (PS) -38618 + (NN) -6343 + (LL) 4844
1D Compatibility (HY) -26400 + (ID) 3250
Total energy: -408053.0 ( -131.42 by residue)
QMean score : 0.292
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