Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFILEVGSLADWVSGLATVGALFWAIKLNSNENRKRLTILFRHSFVSKKNGIIISDGKPKV--FIITPVNNSKFSLEINFRQILLVPSLMDRLLFRAEPKKLSNIEALLKQLENKANWQIIKPNLSGEPIMFDYEFIVKQIKKYADGKRFNFAIEIQFIDSTSKIFKHKEKLELRKIKGL
2XNK Chain:A ((113-187))
--------------------------ISCTSLEKEKREEV---HKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQEKKIT-----------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2XNK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23852 for 461 contacts (-51.7/contact) +
2D Compatibility (PS) -8321 + (NN) -7728 + (LL) 9144
1D Compatibility (HY) -6400 + (ID) 1000
Total energy: -38157.0 ( -82.77 by residue)
QMean score : 0.146
(partial model without unconserved sides chains):
PDB file :
Tito_2XNK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XNK-query.scw
PDB file :
Tito_Scwrl_2XNK.pdb
: