Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGIQWIKLSVNMFDDEKIKLLEKMPEGNQMLIVWIRLLALAGKTNDKGRIYLNENVPYTEDMLATLFNRDVGIIRVTLHTLQSFGMIQKTENGLIEIENWEKHQNVDGMERVREQTRKRVEKHREAMRQNRIASGDSKGNKECNVTSSVTVTQSNAIDIDKELDKDINNNNSDLNFKDFWEQNGFGMMLPVELEKLLAWVDDFAGNREIVMKALEVTSEQGAN----KRNYAYVNKILKNWESRGFKTIADV-DAAEKQRQIELEQKYNKPTYNKYNKPVKEEVLPDWFDKDQKQTKQETSTTGSSEDLEKQVAEIKAQLAARNEVQA |
| 2AE1 Chain:A ((16-96)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AE1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12601 for 382 contacts (33.0/contact) +
2D Compatibility (PS) -7561 + (NN) -4116 + (LL) 18056
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: 15880.0 ( 41.57 by residue)
QMean score : 0.535
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