Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNYLSLSEEVKQAKAEGKAIVALESTIISHGMPYPQNVEMARDVEQIIRDNGAVPATIALIDGKIKIGLSDEELELFAKSSNVAKVSRRDIGYLIATKQLGATTVAATMICAELAEIGIFVTGGIGGVHRGAETTMDVSADLEELAKTNVAVVCAGAKSILDLNLTMEYLETKGVPVIGYQTDVLPAFYTRSSDVELTLRADTPEVIAESLKAKWDLQIEGGAVITNPIPEEFAMDEKVINDVIQTALKEAEENHIHGKDVTPFLLGKVKELTDGKSLEANIELVKHNALIGTQIAVAYQNI |
| 4EX9 Chain:A ((17-312)) | --QLLEVSDEIATALAERRPVVALESSLIT----TDPSSETASLIEKAVRGAGAVPATIGIAGGKLVVGLTDSLIERFASTKGIPKISARDIGGALAGGGLGATTVAGTIVIAERAGIQVFTTAGIGGVHRRGEDTLDISPDLLQFRKTKMTVVSGGAKSILDHRLTAEYLETAGVPVYGYRTDKLAAFVVREADVPVT-RMDDLHTAARAAEAHWQVNGPGTVLLTSPIDEQDAVDEAIVEAAIAEALAQCDQEGIVGNAVSPYLMKALARASGGMLPKAGRSLLLSTARVAGEFSAALSAV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EX9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192201 for 2606 contacts (-73.8/contact) +
2D Compatibility (PS) -32741 + (NN) -16666 + (LL) 388
1D Compatibility (HY) -20400 + (ID) 6200
Total energy: -267820.0 ( -102.77 by residue)
QMean score : 0.651
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