Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIQIALSIGLLLYSISTFLYLYRILKGPTTSDKVVALDSIGMNLVAIVALLSMFYDTHAFLDVILLIALLAFIGTVSFAKFIEKGKVIDRERDN
2HI2 Chain:A ((3-27))
------------------------------------------------------------LIELMIVIAIVGILAAVALPAYQDY----------
General information:
TITO was launched using:
RESULT:
Template:
2HI2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9252 for 95 contacts (-97.4/contact) +
2D Compatibility (PS) -2562 + (NN) -1585 + (LL) 6140
1D Compatibility (HY) -5200 + (ID) 150
Total energy: -12609.0 ( -132.73 by residue)
QMean score : 0.159
(partial model without unconserved sides chains):
PDB file :
Tito_2HI2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HI2-query.scw
PDB file :
Tito_Scwrl_2HI2.pdb
: