Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LDEKTKIYDITIIGGGPVGLFAAFYAGMRNASVKIIESLPQLGGQLSTLYPEKYIYDIPGYPSVRAQELVNNLIQQMKPFDPTVALEEAVQSVEKQVDGTFEIITKKDTHYSKAIIITAGNGAFEPRRLDLPEAEQYEGTNIHYF-INDLSRFSGRRVAVCGGGDSAVDWALMLEKVASSVAIVHRRNAFRAHEHSVNNLEKSSIAIKTPFIPTEVLG--NGDKLT-HITLQEVKGDTTETLEIDDFIINYGFVSSLGPIKNWGLELERNS-IVVNSKMETSIPGIYCAGDICTYDGKVKLIATGFGEAPTAVNNAMNFIDPKTRVQPMHSTSLFE |
| 3F8D Chain:A ((16-319)) | -------FDVIIVGLGPAAYGAALYSARYMLKTLVIGETP--GGQLTE---AGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLD-IVEKIENR---EFVVKTKRKGEF-KADSVILGIGV-KRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKP---NVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202029 for 2592 contacts (-77.9/contact) +
2D Compatibility (PS) -31946 + (NN) -11103 + (LL) 2700
1D Compatibility (HY) -21600 + (ID) 4200
Total energy: -268178.0 ( -103.46 by residue)
QMean score : 0.465
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