Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYRLLSIAFFGIAVICLLFPWMSSGIDAATFELVYEPAYKLIWMQPIIIVGYLGFLCTIFIPKFQRGKNRIVPFIGILILVLGLLNLAVRPLFG-FDSFNFSIIDAYVSELVEPAFLIAVSASILSLIMYAIYLKKSENL
4G7R Chain:A ((32-59))
-------------------------------------------------------------------------------LVLGFLALIVGSLFGPFQALNYGNVDAY---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4G7R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6051 for 106 contacts (-57.1/contact) +
2D Compatibility (PS) -2627 + (NN) -614 + (LL) 11100
1D Compatibility (HY) -5200 + (ID) 750
Total energy: -4142.0 ( -39.08 by residue)
QMean score : -0.222
(partial model without unconserved sides chains):
PDB file :
Tito_4G7R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4G7R-query.scw
PDB file :
Tito_Scwrl_4G7R.pdb
: