Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGIAVLGGAGYIGSHAVDELITRGYEVVVIDNLRTGHRESIHK-------KAKFYEGDIRDKAFLSSVFEKEKVDGVIHFAASSLVGESMEVPLDYLNNNVYGTQIVLEVMEEFDVKHIVFSSSAATYGE----PERVPITEDMPTNPESTYGETKLIMEKMMK--WCDKAYGMKFVALRYFNVAGAKADGSIGEDH-KPESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIRDYVQVEDLIDAHIRALEYL----KNGGESNIFNLGSSNGFSVKEMLEAARTVTGKEIPAEVVPRRAGDPGTLIASSDKAREILGWEPTYTDVKDIIATAWKWHVSHPNGY |
| 1Z45 Chain:A ((14-355)) | --VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIF------RDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPY---------VLNLTAKPDRAKRELKWQ-TELQVEDSCKDLWKWTTENPFGY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z45.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168136 for 2723 contacts (-61.7/contact) +
2D Compatibility (PS) -33373 + (NN) -15816 + (LL) 80
1D Compatibility (HY) -26800 + (ID) 6950
Total energy: -250995.0 ( -92.18 by residue)
QMean score : 0.541
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