Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGNGVQPLDPVAIQIGSISVKWYGVIIASAVVIALLLALSEANKRKMDKEIIVDLLIWAIPISIISARIYYVIFEWDFYKNNLGEIVKIWHGGIAIYGALIGAVLTAIIFSRIKKISFWQLADVVAPSLIIAQAIGRWGNFMNQEAHGAETTRSFLESLHLPDFIINQMYIDGAYYQPTFLYESLWNVLGFVILLIIRRTKIRRGELFLGYVIWYSFGRFFIEGMRTDSLMWGDFRVSQALSLLLIVLSIGIIIYRRLKMNPPYYMEDKFGKVVKKK |
1PRH Chain:A ((266-329)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LMLYATIWLREHQRVCDLLKAEHPTWGDEQLFQTAKLILIGETIKIVIEEYVQQLSGYFLQLKF------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PRH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33456 for 323 contacts (-103.6/contact) +
2D Compatibility (PS) -6550 + (NN) -1826 + (LL) 19004
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -28478.0 ( -88.17 by residue)
QMean score : 0.013
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