Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDIKKIKEILPHRYPFLLVDRVISVEEGKKVTAIKNVTANEEFFNGHFPEYPVMPGVLIVEALAQTSGIAMMQS-EANKGKIGLFAGIDGCRFKRQVVPGDQLLLEAEITRMRGAIAKAKVKAT--VEGDLVCE-AEIMFALSDLPK
3AZB Chain:A ((11-153))
-IDIEDIKKILPHRYPFLLVDKVIYMQPNKTIIGLKQVSTNEPFFNGHFPQKQIMPGVLQIEALAQLAGILCLKSDDSQKNNLFLFAGVDGVRWKKPVLPGDTLTMQANLISFKSSLGIAKLSGVGYVNGKVVINISEMTFALS----
General information:
TITO was launched using:
RESULT:
Template:
3AZB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95654 for 1006 contacts (-95.1/contact) +
2D Compatibility (PS) -14575 + (NN) -339 + (LL) 232
1D Compatibility (HY) -18000 + (ID) 3400
Total energy: -131736.0 ( -130.95 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_3AZB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AZB-query.scw
PDB file :
Tito_Scwrl_3AZB.pdb
: