Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIRVPATTANLGPGFDSCGLALTL-YLTLDIGAEADSWYIEHNIGGGIPHDETNVIIETALNLAPNLTPHHLVMTCDIPPARGLGSSSAAVVAGIELA-----------------NTLAELNLSKEEKVRIAAEIE------GHPDNVAPAVLGNWVVGAKLDGEDFYVRHLFPDCAL--IAFIPKAELLTSESRGVLPDTLPFKEAVQASSIANVMIAAILRNDMTLAGEMMERDLWHEKYRSQLVPHLAQIRDVAKNQGAYAACLSGAGPTVLVFAPRNLANKLQTSLQTLEIDADVLLLDVEGSGAEVFR |
| 1H72 Chain:C ((3-278)) | VRVKAPCTSANLGVGFDVFGLCLKEPYDVIEVEAIDDKEII-------IEVDDKNIPTDPDKNVAGIVAKK---MIDDFNIGKGV---KITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYGELASSGAKHADNVAPAIFGGFTMVTNY--EPLEVLHIPIDFKLDILIAIPNISINTKEAREILPKAVGLKDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVRGKLIPNYFKIKEEVKDK-VYGITISGSGPSIIAFPKEEFIDEVENILR---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134705 for 1945 contacts (-69.3/contact) +
2D Compatibility (PS) -27056 + (NN) -10055 + (LL) 1288
1D Compatibility (HY) -17200 + (ID) 3900
Total energy: -191628.0 ( -98.52 by residue)
QMean score : 0.356
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