Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQILVVDDDRHILKLVGHYLRAEGFHVLEASDGVEAEKIVETEQVHLAVIDVMMPNMDGFELCQKMRASYPDIPVIMLTAKDALADKSRGFEVGTDDYVTKPFEPEELIFRIRALLRRSNQASEVKINIGNITIDQKSYGIKIGNQERMIPVKEFELLYQLASYPGRIFTREELIERIWQRDYDGSDRTVDVHIKRLRDHFDEEKDGIRIVTVRGVGYKLEETR
1MVO Chain:A ((4-122))
-KKILVVDDEESIVTLLQYNLERSGYDVITASDGEEALKKAETEKPDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILMLTAKDEEFDKVLGLELGADDYMTKPFSPREVNARVKAILRRS---------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1MVO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79797 for 957 contacts (-83.4/contact) +
2D Compatibility (PS) -13073 + (NN) -8698 + (LL) 7712
1D Compatibility (HY) -11200 + (ID) 3000
Total energy: -108056.0 ( -112.91 by residue)
QMean score : 0.632
(partial model without unconserved sides chains):
PDB file :
Tito_1MVO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MVO-query.scw
PDB file :
Tito_Scwrl_1MVO.pdb
: