Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MASEVTSAKAVAKTVRIAPRKARIVIDLIRGKQVGEAIAILKYTPRSASPIIEKVLKSAIANAEHNYDLDINNLVVEEAFVDEGPTLKRFRPRAQGRASAINKRTSHITVVVSEVKEG
1J5A Chain:L ((26-130))
---------AVAKYVRMSPRKVRLVVDVIRGKSVQDAEDLLRFIPRSASEPVAKVLNSAKANALHNDEMLEDRLFVKEAYVDAGPTLKRLIPRARGSANIIKKRTSHITIIVAE----
General information:
TITO was launched using:
RESULT:
Template:
1J5A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 294023 for 5151 contacts (57.1/contact) +
2D Compatibility (PS) -10281 + (NN) 2041 + (LL) 1312
1D Compatibility (HY) -800 + (ID) 1050
Total energy: 285245.0 ( 55.38 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_1J5A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J5A-query.scw
PDB file :
Tito_Scwrl_1J5A.pdb
: