Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFLDKELVNLHGSAKNADEAIVQAGELLVNAGYVSEQYVEKMVESYHENGAYFVIAPQIAIPHA--RPTDGVENSAVSLVVLKDGVNFGHAANDPVRLVFGLAATSSEAHLKVIQKIVSLLSNNDNIEKMIHSEDYQAIGELVEG
2FEW Chain:A ((7-146))
---LGAENIFLGRKAATKEEAIRFAGEQLVKGGYVEPEYVQAMLDREKLTPTY--LGESIAVPQGTVEAKDRVLKTGVVFCQYPEGVRFGEEEDDIARLVIGIAARNNE-HIQVITSLTNALDDESVIERLAHTTSVDEVLELLAG
General information:
TITO was launched using:
RESULT:
Template:
2FEW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106773 for 1087 contacts (-98.2/contact) +
2D Compatibility (PS) -15041 + (NN) -7915 + (LL) 780
1D Compatibility (HY) -11600 + (ID) 2350
Total energy: -142899.0 ( -131.46 by residue)
QMean score : 0.679
(partial model without unconserved sides chains):
PDB file :
Tito_2FEW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FEW-query.scw
PDB file :
Tito_Scwrl_2FEW.pdb
: