Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLFLKELESNLTVSKLMELCFEHPNYKDYCSVISTKKGEVLESLSPAGTKVYFVLSGIYGMIVEEDAEMEEESCKECIVRFLQKGDSFGLYHLFYDEWSPHVSMQSLGHGEVMEVDSNFLFS-IFDKKDENNFFMIKVMAEELREAHTFAKLSFLKKEERIRKAILKCAQTLGTFSDNGILLPREITQEVLARYTNTSREYVAHTVMHLIKEDIIRNRPKPLLVMDKTRL
3H3U Chain:A ((44-219))
-----------------------------------------------GDRLYIIISGKVKI------GRRAPDGRENLLTIMGPSDMFGELSIF-DPGPRTSSATTITEVRAVSMDRDALRSWIADRPEISEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQRFGTQEGGALRVTHDLTQEEIAQLVGASRETVNKALADFAHRGWIRLEGKSVLISDSERL
General information:
TITO was launched using:
RESULT:
Template:
3H3U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69245 for 1194 contacts (-58.0/contact) +
2D Compatibility (PS) -18911 + (NN) -10784 + (LL) 4308
1D Compatibility (HY) -8400 + (ID) 2100
Total energy: -105132.0 ( -88.05 by residue)
QMean score : 0.320
(partial model without unconserved sides chains):
PDB file :
Tito_3H3U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H3U-query.scw
PDB file :
Tito_Scwrl_3H3U.pdb
: