Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEITIVKGDITEQEVDVIVNAANSGLLGGGGVDGAIHQAAGPDLLKECQEVINRIGSCPAGEAVITSAGDLKATYIIHAVGPIWKDGEHQEA-NKLASCYWKALDLAAGKDLTSIAFPNISTGVYGFPKKLAAEVALYTVRKWAEEEYDTSIKEIRFVCFDEENLKLYNKLINSEVV
3Q6Z Chain:A ((39-211))
--LIVQQGDLARLPVDVVVNASNEDLKHYGGLAAALSKAAGPELQADCDQIVKREGRLLPGNATISKAGKLPYHHVIHAVGPRWSGYEAPRCVYLLRRAVQLSLCLAEKYKYRSIAIPAISSGVFGFPLGRCVETIVSAIKENFQFKK-HCLKEIYLVDVSEKTVEAFAEAVKT---
General information:
TITO was launched using:
RESULT:
Template:
3Q6Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144718 for 1446 contacts (-100.1/contact) +
2D Compatibility (PS) -19049 + (NN) -15152 + (LL) 724
1D Compatibility (HY) -10000 + (ID) 2800
Total energy: -190995.0 ( -132.09 by residue)
QMean score : 0.645
(partial model without unconserved sides chains):
PDB file :
Tito_3Q6Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q6Z-query.scw
PDB file :
Tito_Scwrl_3Q6Z.pdb
: