Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIRNLTKKMDDNLVLKDVSFDLKAGEITALIGRNGVGKTTLFSTMTGIYLPDEGD--VFLDEESIFK-HPEVKQQLFFLEDNMNHFNTYSV----QTVVKIYRQIYTTFDEAFFNELMQQFELPMKAKLM--SFSKGRKALFFIILAFSLNVRFLLLDEPLDGLD---IIIKKQILATIKDTVKKRGTSVVIASHRLEELEAIADRV-IVLKGASVELDYYLEDMRTDAVKIQVAFKTKKIPGFVKNNAQLLYRNGRIYTLLVTENASSFLAELRLEEPVLLEEMSISIEDIFTVHLANDKIDYYEI |
4P33 Chain:A ((3-212)) | LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDQPFAGVDPISVIDIKRIIEHLRDS----GLGVLITDHNVRETLAVCERAYIVSQG---------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4P33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -135767 for 1483 contacts (-91.5/contact) +
2D Compatibility (PS) -20912 + (NN) -3380 + (LL) 8760
1D Compatibility (HY) -11200 + (ID) 3300
Total energy: -165799.0 ( -111.80 by residue)
QMean score : 0.380
|
|
|