Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNIMLMCNAGMSTSVLVRKMERVVEERNLELTIWAISETDFEKNWRKADAILLGPQVNYMKDKVIDTVGDNVSVAVIDIVDYGRMNGEKVLDLAISLL
1E2B Chain:A ((4-93))
-KHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQIAYMLPE-IQRLLPNKPVEVIDSLLYGKVDGLGVL-------
General information:
TITO was launched using:
RESULT:
Template:
1E2B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67406 for 726 contacts (-92.8/contact) +
2D Compatibility (PS) -9647 + (NN) -3446 + (LL) 1172
1D Compatibility (HY) -8400 + (ID) 1900
Total energy: -89627.0 ( -123.45 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_1E2B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E2B-query.scw
PDB file :
Tito_Scwrl_1E2B.pdb
: