Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPFSRLFGKKEKNQMDDIVEEGVQRVQELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVIQPIVVREMEP----DYYEIIAGERRFRAVLSLEMEKIPAIIQNLDDEEVAAIALIENLQREELTPIEEAKAYRSLLDMQDVTQEA---LAQRVGKSQSAIANKMRLLKLPETVQEAVLIKQISERHAR------SLLALETEEQQVALLAEIAENHWNVKQTEARIQEILGVKKQVATKKTKPKRQA--ISRDVRIAMNTIKQSVTMVKDNGMDLDFTEEETDDFYQITIQIPKKK |
| 1TW3 Chain:A ((17-249)) | ------------------------------------------------QIDALRTLIRLGSLHTPMVVRTAATLRLVDH--ILAGARTVKALAARTDTRPEALLRLI--RHLVAIGLLEEDAPGEFVPTEVGEL---LADDHPAAQRAWHDLTQAVARADISFTRLPDAIRTGRPTYESIYGKPFYEDLAGRPDLRASFDSLLACDQDVAFDAPAAAYDWT------NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLS-DRVDVVEGDFFE---PLPRK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TW3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 30813 for 1474 contacts (20.9/contact) +
2D Compatibility (PS) -22087 + (NN) 1077 + (LL) 4668
1D Compatibility (HY) -8400 + (ID) 2850
Total energy: 3221.0 ( 2.19 by residue)
QMean score : 0.133
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