Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLDRVTLEDIEVNLKAEDWREAIQMSARLLLERGAIKESYIDGMIQSVENNGPYIVIAKHIALAHTRPEFG--VIHGGLTFATLADGVAFGSDMFDPVKLIITLAATDSESHLEVLSELAEVLMDEEKVTRLIEANSSQAFYDELTKEG
1J6T Chain:A ((4-136))
--LFKLGAENIFLGRKAATKEEAIRFAGEQLVKGGYVEPEYVQAMLDREKLTPTYL--GESIAVPHGTVEAKDRVLKTGVVFCQYPEGVRFGEEEDDIARLVIGIAARNNE-HIQVITSLTNALDDESVIERLAHTTS------------
General information:
TITO was launched using:
RESULT:
Template:
1J6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91419 for 1015 contacts (-90.1/contact) +
2D Compatibility (PS) -14194 + (NN) -6225 + (LL) 1464
1D Compatibility (HY) -9200 + (ID) 1950
Total energy: -121524.0 ( -119.73 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_1J6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J6T-query.scw
PDB file :
Tito_Scwrl_1J6T.pdb
: