Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VGNSVMEKIKGGLVVSCQALEDEPLHSAFIMSKMALAAVQGGAVGIRANTAKDIRAIQSEIDVPIIGIYKKDYDDSDVFITPTLKEVREICETGVEIVAMDATTRKRPHNEDLKDILSAIRKEFPNTLFMADTASIEDVYYADSLGFDLIGTTLYGYTEETANKNISDDDFSHLKEVLKSTKRPVIAEGKIDSPSKARQVLTLGCYAVVVGGAVTRPQEITTRFTNEIQKIQEERGK
3IGS Chain:A ((17-229))
---------SGGLIVSCQPVPGSPLDKPEIVAAMALAAEQAGAVAVRIEGIDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQRP--VAVEALLARIHHH--HLLTMADCSSVDDGLACQRLGADIIGTTMSGYTTPDTPE---EPDLPLVKALHDAGCR-VIAEGRYNSPALAAEAIRYGAWAVTVGSAITRLEHICGWYNDALKK-------
General information:
TITO was launched using:
RESULT:
Template:
3IGS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129835 for 1835 contacts (-70.8/contact) +
2D Compatibility (PS) -22971 + (NN) -11523 + (LL) 1120
1D Compatibility (HY) -16400 + (ID) 4250
Total energy: -183859.0 ( -100.20 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_3IGS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IGS-query.scw
PDB file :
Tito_Scwrl_3IGS.pdb
: