Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VFNIQTFNAIAKEGLKTFDLEKY-----VIDANQPADGILLRSYNLHD--FDFPETVKAVARAGAGVNNIPVENCSEKGIVVFNTPGANANAVKELVLASLFVSARPILEGTEWVKELPAEDDVEQKVEAGKKAFAGTELAGKKLGIIGLGAIGALVANDALSLGMDVVGYDPFVSVDTAWRISKEVERAMTIEEVLATCDYLTVHVPLTDKTRGMFNADTLQLVKDNAVLLNFSRGELVDSASVKEALDDGLLRLYITDFA--TKELLNHKKVHVFP---HLGASTEEAETNCAKMAAKELQSYLETGSIKNSVNFPNVEMPYNGHPRIGICHKNIPNMVGQITTELGKYSLNILDMINRSKNEYAYTLIDIDKETQANLEQLKQDLLAVQGVLRVRVIEPLGVTV |
| 4NFY Chain:A ((23-297)) | ---------LEKAGHEVVMIEKYKKKEDVIERIKDADGVIVRSDKIDEEIIKAGEKVKIIVRAGAGYDNIDIEACNQGKIVVMNTPGQNRNGVAELCIGMMIFGFRK-----------------------GFKEGKGRELKDKTLGICGCGYVGKRVKEIAEGIGMKIKVYDPFITTENQVK---------KIEELFEECQVISLHLPLTKETKGKIGYELIKKLPYGGMICNTARKEIIDEEGLIRIMREREDLIYITDVAPTSKVFNNEFKGRFFATPIKIGAETEESNINAGMAAASQICDFFTNGTVKFQVN------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NFY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148412 for 2030 contacts (-73.1/contact) +
2D Compatibility (PS) -28415 + (NN) -10203 + (LL) 10248
1D Compatibility (HY) -22800 + (ID) 4600
Total energy: -204182.0 ( -100.58 by residue)
QMean score : 0.535
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