Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------MELIFRIFEMKKTLYITNKLFFANWFVPVI--GAVLIQVIGIIVSRRLVVKLLPDDYKF------------NLYIALLLFVPILASILLFLIYFQKRDFTSLGFTKDNNVLTTISGFI-----TGSLLMFFIYICHWLSGFVEISSSNSFSFGPFFFLFLAYFIQSLTEEI-------LFRGYVMTT------------VTKFKGSFAGVLCNSMLFSFIHFRNYGITAIALFNLFLLGIIF-SILFNMTKNILFVTGVHTTWNFTMGCVLGNKVSGGYSPVSLFRITENSSFALWNGGD--FGFEGGVLCSLILVGCLAYFS--LESVRVSVRY----------------- |
4P6V Chain:B ((38-409)) | GLVTKRSSHVRDSVDLKRIMIMVWLAVFPAMFWGMYNAGGQAIAALNHLYSGDQLAAIVAGNWHYWLTEMLGGTMGSKMLLGATYFLPIYATVFIVGGFWEVLFCMVRKHEVNEGFFVTSILFALIVPPTLPLWQAALGITFGVVVAKEVFGGTGRNFLNPALAGRAFLFFAYPAQISGDLVWTAADGYSGATALSQWAQGGAGALINIPGSIGEVSTLALMIGAAFIVYMGIASWRIIGGVMIGMILLSTLFNVIGS-----DTNAMFNMPWHLVLG-----GFAFGMFFMATDPVSASFTNSGKWAYGILIGVMCVLIRVVNPAYPEGMMLAILFANLFAPLFDHVVVERNIKRRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -261607 for 2107 contacts (-124.2/contact) +
2D Compatibility (PS) -28293 + (NN) -2651 + (LL) 732
1D Compatibility (HY) -18400 + (ID) 2600
Total energy: -312819.0 ( -148.47 by residue)
QMean score : 0.243
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