Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIAIDAMGGDYAPKAIVEGVNQAISDFSDIEVQLYGDQKKIEKYLTVT----ERVSIIHTEEKINSDDEPAKAV---RRKKQS-----------SMVLGAKAVKDGVAQAFISAG--NTGALLAAGLFVVGRIKGVDRPGLMSTMPTLD-GVGFDMLDLGANAENTASHLHQYAILGSFYAKNVRGIEVPRVGLLNNGTEETKG---DSLHKEAYELLAA-EPSINFIGNIEAR--------------DLMSSVADVVVT-DGFTGNAVLKTMEGTAMSIMGSLKSSIKSGGVKAKLGALLLKDSLYQLKDSMDYSSAGGAVLFGLKAPIVKCHGSSDSKAVYSTLKQVRTMLETQVVDQLVDAFTDE |
| 1R5J Chain:A ((26-328)) | ----------GN-DE-RVVRAAARLKFE-GLLEPIILGQSEEVRNLLTKLGFADQDYTIINPNEYADF-DKMKEAFVEVR-KGKATLEDADKMLRDVNYFGVMLVKMGLADGMVSGAIHSTADTVRPALQIIKTKPGISRTSGVFLMNRENTSERYVFADCAINIDPTAQELAEIAVNTAETAK-IFDI-DPKIAMLSFSTKGSGKAPQVDKVREATEIATGLNPDLALDGELQFDAAFVPETAAIKAPDSAVAGQANTFVFPDLQSGNIGYKIA-------------------------------------QRLGMFDAIGPILQGLNKPVNDLSRGSSAEDIYKLAIITAAQAIES------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2678 for 1940 contacts (-1.4/contact) +
2D Compatibility (PS) -25513 + (NN) 3404 + (LL) 5088
1D Compatibility (HY) 9200 + (ID) 1350
Total energy: -11849.0 ( -6.11 by residue)
QMean score : 0.196
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