Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKANQLIAAIFDVNNTFMQGCNVVFDLALLNLLFMITCLPLVTIGAAKISLYRTLWQKLEGDQTNLLILYIKHLKKEWFQGMLLGLVELSILVVIIFDLTILHYQIGFIVSFLKITCYAFLLLTVMTSIYLFPMAARYEMSLLDTVKKSFIMACLNLKWTGVLMFLLIMTWFIMVQSSLLFMLTVSAIFIFAYTAFAYFKIIILQKQFAYFSKQQGDYQ |
| 2JQ3 Chain:A ((39-61)) | -------------------------------------------------------ARGWVTD-GFSSLKDYWSTVKDKFSEFWDLDPEVRPTSAVAA--------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2JQ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -1220 for 95 contacts (-12.8/contact) +
2D Compatibility (PS) -2387 + (NN) -2000 + (LL) 19712
1D Compatibility (HY) -400 + (ID) 150
Total energy: 13555.0 ( 142.68 by residue)
QMean score : 0.379
|
|
|