Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTRTVAIDIGGTMIKHGIVDNLGCIVEASELATEAYKGGPGILQKVCQIIDNYLTEGSIDGIAISSAGMVDPDEGCIFYSGPQIPNYAGTQFKKVLEDTYQVRTEIENDVNCAGLAEAVSGSAKDSSIALCLTIGTGIGGCLIIDKTVFHGFSNSACEVGYMHL----------SDGDFQDLASTTALI-------------ADVAKAHGD-EISRWDGRRIFQEAKEGNEKCIASIDRMINYLGQGIANMVYVVNPEKVVLGGGIMAQKDYLQDKLSESLKRNLVTSLAEKTAIVF-AQHENQAGMLGAYYHFKNRG
3VGK Chain:A ((3-306))--LTIGVDIGGTKIAAGVVDEEGRILSTFKVATPPTA--EGIVDAICAAVAGASEGHDVEAVGIGAAGYVDDKRATVLFA-PNI-DWRHEPLKDKVEQRVGLPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDGLLCGCGSQGCWEQYASGRALVRYAKQRANATPENAAVLLGLGDGSVDGIEGKHISEAARQGDPVAVDSFRELARWAGAGLADLASLFDPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLARQG-


General information:
TITO was launched using:
RESULT:

Template: 3VGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -195839 for 2419 contacts (-81.0/contact) +
2D Compatibility (PS) -29347 + (NN) -7380 + (LL) -304
1D Compatibility (HY) -18000 + (ID) 4000
Total energy: -254870.0 ( -105.36 by residue)
QMean score : 0.414

(partial model without unconserved sides chains):
PDB file : Tito_3VGK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VGK-query.scw
PDB file : Tito_Scwrl_3VGK.pdb: