Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKIIVHAFINSGKIGVVEV----LFATSDDKLLMTKMSEFQRHYPGDYLAIYDLPLDTDLNKLSHYPSVAISKEDFHEEKANETNENS
1RBL Chain:M ((51-89))
--------------EFYWTMWKLPLFACAAPQQVLDEVRECRSEYGDCYIRVAGFDNIKECQTSSFIVHRPGR----------------
General information:
TITO was launched using:
RESULT:
Template:
1RBL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6935 for 135 contacts (-51.4/contact) +
2D Compatibility (PS) -3646 + (NN) -1188 + (LL) 1696
1D Compatibility (HY) -4000 + (ID) 300
Total energy: -14373.0 ( -106.47 by residue)
QMean score : 0.152
(partial model without unconserved sides chains):
PDB file :
Tito_1RBL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RBL-query.scw
PDB file :
Tito_Scwrl_1RBL.pdb
: