Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISKPDKNKIRQKRHRRVRGKLSGTADRPRLNIFRSNTGIYAQVIDDVAGVTLASASTLDKEVSNGTKTEQAVVVGKLVAERAVAKGISEVVFDRGGYLYHGRVKALADSARENGLKF
2ZJP Chain:L ((26-111))
---------------------------RLRLSVYRSSKHIYAQIIDDSRGQTLAAASSAALK--SGNKTDTAAAVGKALAAAAAEKGIKQVVFDRGSYKYHGRVKALADAAREGG---
General information:
TITO was launched using:
RESULT:
Template:
2ZJP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21544 for 647 contacts (-33.3/contact) +
2D Compatibility (PS) -9086 + (NN) -2694 + (LL) 1928
1D Compatibility (HY) -4000 + (ID) 2550
Total energy: -37946.0 ( -58.65 by residue)
QMean score : 0.317
(partial model without unconserved sides chains):
PDB file :
Tito_2ZJP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZJP-query.scw
PDB file :
Tito_Scwrl_2ZJP.pdb
: