Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLHELKPAEGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRMPKRGFSNINAKEYALVNLDQLNVFEDGTEVTPVVLKEAGIVRAEKSGVKILGNGELTKKLSVKAAKFSKSAEAAITAKGGSIEVI
3IY9 Chain:L ((1116-1258))
MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEIRLSDLAKVEGGV-VDLNTLKAANIIGIQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIE--
General information:
TITO was launched using:
RESULT:
Template:
3IY9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1211056 for 6786 contacts (178.5/contact) +
2D Compatibility (PS) -12099 + (NN) -2121 + (LL) 232
1D Compatibility (HY) 800 + (ID) 650
Total energy: 1197218.0 ( 176.42 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_3IY9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IY9-query.scw
PDB file :
Tito_Scwrl_3IY9.pdb
: