Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKMTVYFDGNFWLGLIEYDDDGDYKVFRYFFGKEPKDDDVFNFINHKLNDLIKK-YEFVKTDISLKRTNEHKKSPKRMQREINREKRKPVVSTKAQLAMKTIHMSIKNERQLSQKCKKNELRKHRYQLKQEKRYQKKKGH |
3FIE Chain:A ((310-359)) | ----------------EYDINEYKDYFQWKYGLDKNADGSYTVNENKFNEIYKKLYSFTEIDLANKFKVKCRNTYFIKYGFLKVPNLLDDDIYTVSEGFNIGNLAVNNRGQNIKLNPKIIDSI----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FIE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2808 for 218 contacts (12.9/contact) +
2D Compatibility (PS) -4954 + (NN) 1099 + (LL) 2292
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -2255.0 ( -10.34 by residue)
QMean score : 0.020
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