Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKNKIIRFSLVGVLLAILCFSLFALLKPNSQQSSSQKLRNEDIKKISSQKRNKKLQLPAVSSKDWNLILVNRDHKHEELSPDVVPVENIYLDKRITKQATQFLEAARAIDSREHLISGYRSVAYQEKLFNSYVTQEMTSNPNLTRGQAEKLVKTYSQPAGASEHQTGLAMDMSTVDSLNESDPRVVSQLKKIAPQYGFVLRFPDGKTAETGVGYEDWHYRYVGVESAKYMAKHHLTLEEYITLLKENNQ |
| 4NT9 Chain:B ((54-212)) | -------------------------------------------------------------------IIVAN---KHYPLSKDYNPGENPTAKAELVKLIKAMQEAGFPISDH---YSGFRSYETQTKLYQDYVNQDGKAAAD-----------RYSARPGYSEHQTGLAFDVIGTDGDLVTEEKAAQWLLDHAADYGFVVRYLKGKEKETGYMAEEWHLRYVGKE-AKEIAASGLSLEEYYGFEGGDYV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16419 for 1220 contacts (-13.5/contact) +
2D Compatibility (PS) -16193 + (NN) -2457 + (LL) 6412
1D Compatibility (HY) -7600 + (ID) 3250
Total energy: -39507.0 ( -32.38 by residue)
QMean score : 0.470
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