Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKRFSLLNFIVVTFIFFFFILFPLLNHKGKVDANSRQSVTYTKEEFIQKIVPDAQDLGKSYGIRPSFIIAQAALDSDFGEKILANKYHNLFGLLAEPGTPSITLNDSSTGKKQEKQFTHYKSWKYSMYDYLAHIKSGATGKK---DSYTIMVSVKNPKTLVQKLQDSGFDNDKKYAKKMTEIIDLYDLTRYDK |
| 3MBD Chain:A ((6-61)) | --------------------------------------------------------------------------------------------------------------------------------MDCDHLLRLGMTAKKILENGKGILAADETPKTLGRRFEKLGITNTEENRRKFREILFSTKGIERYI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MBD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4146 for 224 contacts (18.5/contact) +
2D Compatibility (PS) -5802 + (NN) -2748 + (LL) 8688
1D Compatibility (HY) -2000 + (ID) 750
Total energy: 1534.0 ( 6.85 by residue)
QMean score : 0.423
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