Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVTKVEEIRSYLIASIQNGKLAPGDRLPSIRQLANQFSCNKDTVQRVLMELRFDNYVYAKPRSGYYV--FDSHEEEVEEGVSLPN--SEIANIAYDDFRLCLNETLIGREDYLFNYYYRQE------------------GLLDLSKAVAKLMEET-GVYVPLDDIVITAGTQQALFILTQVTFPNRKSRVLIEEPTYPRMIELIKTQNLPYETISRGTHGIDFQRLEEIFQTQSIKFFYVIPRMHNPLGTSYNPV--EMKRLIEMAEKYDVYIVEDDYMSDFA----SQSPLHYYDTHGRVIYLKSFSKAIFPALRLAAICLPQALKSTFMAYKKLMDYD---TNLILQKALALYIENGLYGKNSQYLKYRYQKDLANSKSILADQPNLPPYSLHHDSVLFDCSKLDNFKILRQYGDTLENYFCQKSHQSLLQVKNDSCLKQFLGSL |
| 4MGR Chain:A ((18-373)) | -----QQIYQKLKKEILSRNLLPHSKVPSKRELAENLKVSVNSVNSAYQQLLAEGYLYAIERKGFFVEELDMFSAEEHPPFALPDDLKEI-HIDQSDW-ISFSHMSSDTDHFPIKSWFRCEQKAASRSYRTLGDMSHPQGIYEVRAAITRLISLTRGVKCRPEQMIIGAGTQVLMQLLTEL-LP-KEAVYAMEEPGYRRMYQLLKNAGKQVKTIMLDEKGMS---IAEITRQQP-DVLVTTPSHQFPSGT-IMPVSRRIQLLNWAAEEPRRYIIEDDYDSEFTYDVDSIPALQSLDRFQNVIYMGTFSKSLLPGLRISYMVLPPEL---LRAYKQ-RGYDLQTCSSLTQLTLQEFIESGEYQKHIKKMKQHYKEKRERLITALEAEFSGEVTVKGANAGLHFVTEFDTRRTEQDILSHAAGLQLEIFGMSRFNLKENKRQTGRPALI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MGR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180842 for 2328 contacts (-77.7/contact) +
2D Compatibility (PS) -36325 + (NN) -23828 + (LL) 1716
1D Compatibility (HY) -22800 + (ID) 5100
Total energy: -267179.0 ( -114.77 by residue)
QMean score : 0.519
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