Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRYKAQISYDGSAFSGFQRQPNCRTVQEEIERTLKRL-----NSGNDV---IIHGAGRTDAGVHAYGQVIHFDLPQARDV-EKLRFGLDTQCPDDIDIVKVEQVSDDFHCRYDKHIKTYEFLVDIGRPKNPMMRNY--ATHYPYPVIIELMQEAIKDLV---GTHDFTGFTAS-GTSVENKVRTIFDAKIQFEASKNLLIFTFT---GNGFLYKQVRNMVGTLLKIGNGRMPISQIKTILQAKNRDLAGPTAAGNGLYLKEIIYEDKECFSNFRK |
| 4NZ6 Chain:A ((9-260)) | -------MAYSGKGYHGMQR--QFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRCARTDKGVSAAGQVVSLKVWLIDDILEKI----NSHLPSHIRILGLKRVTGGFNSKNRCDARTYCYLL----PTFAFAHKDRDVQDETYRLSAETLQQVNRLLACYKGTHNFHNFTSQKGPQDPSACRYILEMYCEEPFVREGLEFAVIRVKGQSFMMHQIRKMVGLVVAIVKGYAPESVLERSWGTEKVDV--PKAPGLGLVLERVHFEKYNQRFGNLH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NZ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90773 for 1636 contacts (-55.5/contact) +
2D Compatibility (PS) -24660 + (NN) -7590 + (LL) 1024
1D Compatibility (HY) -14800 + (ID) 3300
Total energy: -140099.0 ( -85.64 by residue)
QMean score : 0.376
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