Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITLEKFIDHLNVEEVLFTFFTKLISILLLIIAFVIVRQVINYLFEKTVNRSLAFSRQKVARQKTLAKLSHNVLNYTLYFFLFYWILSILGVPISSLLAGAGIAGVAIGLGAQGFLSDVVNGFFILLENQFDVGDIINVGTVSGTVTNVGIRTTQIHDFDGTLHFIPNRNITI--VSNKSRSNMRA-QIDIPLFVHTNLDQISDIVTKI--NEEYVSKHPAIVGEPTVFGPTTNANGQFVYRINIFTQNGAQFDIYAEFYKLYQKAILEEGIDLPTYNFSNNHSR |
| 4AGE Chain:A ((25-279)) | -----------------LSYAVNIVAAL----AIIIVGLIIARMISNAVNR-LMISRKIDA---TVACFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSI---NFVVR--VWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AGE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123436 for 1594 contacts (-77.4/contact) +
2D Compatibility (PS) -26547 + (NN) -8632 + (LL) 3008
1D Compatibility (HY) -23200 + (ID) 3550
Total energy: -182357.0 ( -114.40 by residue)
QMean score : 0.291
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