Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTSFENKATNRGIITFTISQDEIKPALDQAFNKVKKDLNVPGFRKGHMPRTVFNQKFGEEALYENALNLVL---PKAYEAAVAELGLDVVAQPKIDVVSMEKGQDWKLTAEVVTKPEVKLGDYKDLSVEVDASKEVSAEEVDAKVERERNNLAELTVKDGEAAQGDTVVIDF-VGSVDGVEFDGGKGDNFSLELGSGQFIPGFEEQLVGSKAGQTVDVNVTFPEDYQAEDLAGKDAKFVTTIHEVKTKEVPALDDELAKDIDDEVETLDELKAKYRKELESAKEIAFDDAVEGAAIELAVANAEIVELPEEMVHDEVHRAMNEFMGNMQRQGISPEMYFQLTGT--TEEDLHKQYQADADKRVKTNLVIEAIAAAEGFEATDEEIEKEITDLASEYNMEADQVRGLLSA-----DMLKHDIAMKKAVDVITSSATVK |
| 3GU0 Chain:A ((11-401)) | ----------NRVVLEYVFGAEEIAQAEDKAVRYLNQRVEIPGFRKGRIPKNVLKMKLGEE-FQEYTLDFLMDLIPDTLKDRKLILSPIVTERELKDVTA-------RVVVEVHEEPEVRIGDISKIEVEKVDEEKVLEKYVERRIEDLRESHALLEPKEGPAEAGDLVRVNMEVYNEEGKKLTSREYEYVISEDEDRPFV----KDLVGKKKGDVVEIEREY---------EGKKYTYKLEVEEVYKRTLPEIGDELAKSVNNEFETLEQLKESLKKE---GKEIYDVEMKESMREQLLEKLPEIVEI--EISDRTLEILVNEAINRLKREG----RYEQIVSSYESEEKFREELKERILDDIKRDRVIEVLAQEKGISVNDEELEKEAEELAPFWGISPDRAKSLVKARQDLREELRWAILKRKVLDLLLQEVE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GU0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34111 for 2425 contacts (-14.1/contact) +
2D Compatibility (PS) -40043 + (NN) -5827 + (LL) 1920
1D Compatibility (HY) -22800 + (ID) 5700
Total energy: -106561.0 ( -43.94 by residue)
QMean score : 0.456
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