Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLIILTVILVLVIVLLITSLYVVKQQTVAIIERFGKYQKTATSGIHIRVPLGIDKIAARVQLRLLQSEIIVETKTKDNVFVTLNIATQYRVNENNVTDAYYKLIKPEA-QIKSYIEDALRSSVPKLTLDEL-------FEKKDEIALEVQHQVAEEMSTYGYI-----IVKTLITKVEPDAEVKQSMNEINAAQRKR----VAAQELANADKIKIVTAAEAEAEKDRLHGVGIAQQRKAIVDGLADSIQELKDANVTLTEEQIMSIL---LTNQYLDTLNTFAINGNQTIFLPNNPEGVEDIRTQVLSALKTR |
4GIL Chain:A ((29-217)) | --------------------------------------------------------------------------------------------------------ISPELLQISPEVQDALKNKKPVVALESTIISHGMPFPQNAQTAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEEIELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTVVCAGAKSILDLGLTTEYLETFGVPLI-GYQTKALPAFFCRTSPFDVSIRLDSASE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4GIL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 11694 for 1251 contacts (9.3/contact) +
2D Compatibility (PS) -17110 + (NN) 3883 + (LL) 10800
1D Compatibility (HY) -2400 + (ID) 2350
Total energy: 4517.0 ( 3.61 by residue)
QMean score : 0.155
|
|
|