Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFSEIFKFCISILWYFILTKNKGVVVMRAWKGIVLILSSIVVTLVAWQNAGLSEFVVPGLALTSLSLTFLLSTKFRILESYFQGIENMYFYHKVMAVFSMILLLLHKIGLGQGGHGSEFAKTIGSAGLYLFLSIVFVAYFGNFLKYEIWRFIHRFVYLVYILGLVHTFLILGDRILGNTLLSLIVLGYAVIGVISGFYIIFLYSRMRFRRVGYVQKVTHLNHDTTEIEIAMKRPYRYDYGQFTFLKIYQAGFESAAHPFSISGGHDR--VIFLTVKAS-----------GDYTKSIYKQLKVGTKIALDRAYGHMLFDKDKKEQVWIAGGIGITPFISFIREN--SILTKR-VDFFYTFSNQDNLIYQDMLESYAKANPNFKLHLNNSSLQGRLDFS-------QSVFEG---------QPTIFMCGPTSMTSTYAKVFRQKDAKSRLVYEGFSFRDSWLSIFLLKTFDKVYSNLIK |
| 4P6V Chain:F ((162-393)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FRAGGYIQ-IEAPAHHVKYADFDVPEKYRGDWDKFNLFRYESKVDEPIIRAYSMANYPEEFGIIMLNVRIATPPPNNPNVPPGQMSSYIW-SLKAGDKCTISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLKSKRKMSYWYGARSKREMFYVEDFDGLAAENDNFVWHCALSDPQPEDNWTGYTGFIHNVLYENYLKDHEAPEDCEYYMCGPPMMNAAVINMLKNLGVEEENILLDDFGG--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107180 for 1414 contacts (-75.8/contact) +
2D Compatibility (PS) -21003 + (NN) 908 + (LL) 21384
1D Compatibility (HY) -16800 + (ID) 2400
Total energy: -125091.0 ( -88.47 by residue)
QMean score : 0.387
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