Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKEVVVESFELDHTIVKAPYVRLISEEVGPVGDIITNFDIRLIQPNENAIDTAGLHTIEHLLAKLIRQRINGLIDCSPFGCRTGFHMIMWGKQDATEIAKVIKSSLEAIAGGVTWEDVPGTTIESCGNYKDHSLHSAQEWAKLILSQGISDNAFERHIV
1J6X Chain:A ((5-143))
------VESFNLDHTKVKAPYVRIADRKKGVNGDLIVKYDVRFKQPNRDHMDMPSLHSLEHLVAEIIRNHANYVVDWSPMGCQTGFYLTVLNHDNYTEILEVLEKTMQDVLKA---KEVPASNEKQCGWAANHTLEGAQNLARAFLDKRAEWSEVG----
General information:
TITO was launched using:
RESULT:
Template:
1J6X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74023 for 1005 contacts (-73.7/contact) +
2D Compatibility (PS) -15065 + (NN) -8075 + (LL) 1140
1D Compatibility (HY) -11600 + (ID) 2800
Total energy: -110423.0 ( -109.87 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_1J6X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J6X-query.scw
PDB file :
Tito_Scwrl_1J6X.pdb
: