Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNCIFCKIISGEIPSSKVYEDDEVLAFLDITQTTTGHTLLIPKKHVRNVLEMDEKTAQITFERLPKVARAVQAATKAKGMNIINNNEEIAGQTVFHAHVHLVPRF--DESDGIKIHYTTHEPDFEALAKLAKEIRKEIQL
2EO4 Chain:A ((1-137))
---CTFCSIINRELEGYFVYEDEKFAAILDKYPVSLGHTLVIPKKHFENYLEADEDTLAELAKVVKLVSLGIKDAVKADGLRLLTNIGRSAGQVIFHLHVHIIPTWEGDYPDIFKSFKPRKEQEKEYYELLQKIIRESIEN
General information:
TITO was launched using:
RESULT:
Template:
2EO4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65186 for 1013 contacts (-64.3/contact) +
2D Compatibility (PS) -14620 + (NN) -5661 + (LL) 52
1D Compatibility (HY) -9600 + (ID) 2650
Total energy: -97665.0 ( -96.41 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_2EO4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EO4-query.scw
PDB file :
Tito_Scwrl_2EO4.pdb
: