Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRRKSMTTTFKIIRGYYLTGVGQEPSAYYFKIRDDFPEFETLKSGDVALTFYQNGEAITSLPALIRI------DGVIEAEKQVLEFLQSEKKDHLPMLPLVALYEQFDPLQFNTVMEVFDNLKAEIKRLAKVNYVQGDLFDFMQEGEG |
3GWQ Chain:A ((193-226)) | -------------------------------------------------------EAITRYPDTLKLAGVELYEGVLKEEHEVREFLQSAVAVTRELVEQERFARAPAVLSGAGSAWYDVVAEEFVKASETGKVEVVLRPGCYLTHDV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GWQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -2739 for 105 contacts (-26.1/contact) +
2D Compatibility (PS) -2756 + (NN) -74 + (LL) 3336
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -5733.0 ( -54.60 by residue)
QMean score : 0.082
|
|
|