Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKDLTKIDRDLEEAKKKVADLENEKRQAEENLQKQIGKLYVQIQLKKDKSQSYETILDDLKTELELIKQEEKARREEAKNRQLTSSDEH
2YO3 Chain:A ((212-247))
------TYTDQKMGEMNSKIKGVENKMKQIEDKIEEILSKIYHIENEIARIKK--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2YO3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5508 for 136 contacts (40.5/contact) +
2D Compatibility (PS) -4147 + (NN) -4188 + (LL) 4256
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -1471.0 ( -10.82 by residue)
QMean score : 0.801
(partial model without unconserved sides chains):
PDB file :
Tito_2YO3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YO3-query.scw
PDB file :
Tito_Scwrl_2YO3.pdb
: