Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSTVKVVYFSSKSNNTHRFVQKLAWSNQRIPSDGSNILVTEDYILIVPTYAGGGDDTKGAVPKQVVQFLNVRQNREHCQGVISSGNTNFGDTYAIAGPIIARKLNVPLLHQFELLGTQEDVTRVKELLCQFTRKDK
2X2O Chain:A ((2-111))
------LVAYDSMTGNVKRFIHKLNMPAVQIDED---LVIDEDFILI--TYTTGF----GNVPERVLDFL--ERNNEKLKGVSASGNRNWGDMFGASADKISTKYEVPIVSKFELSGTNNDVEYFKERVREIA----
General information:
TITO was launched using:
RESULT:
Template:
2X2O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78098 for 853 contacts (-91.6/contact) +
2D Compatibility (PS) -11434 + (NN) -2616 + (LL) 788
1D Compatibility (HY) -11600 + (ID) 2300
Total energy: -105260.0 ( -123.40 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_2X2O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X2O-query.scw
PDB file :
Tito_Scwrl_2X2O.pdb
: