Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTITTFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYNNPMVKKALEKQIPVLTEVE-LAYLVSESQLIGITGSNGKTTTTTMIAEVLNA---------GGQRGLLAGNIGFPASE-VVQAADDKDILVMELSSFQLMGVKEFRPHIAVITNLMPTHLD-YHGSFEDYVAAKWNIQNQMSSSDFLVLNFNQGISKELAKTTKATIVPFSTTEKVDGAYVQDKQLFYKGENIMLVDD-------IGVPGSHNVENALATIAVAKLAGISNQVIRETLSNFGGVKHRLQSL-------GKVHGISFYNDSKSTNILATQKALSGFDNTKVILIAGGLDRGNEFDELIPDITGLKHMVVLGESASRVKRAAQKAGVTYSDALDVRDAVHKAYEVAQQGDVILLSPANASWDMYKNFEVRGDEFIDTFESLRGE |
| 1P31 Chain:A ((57-372)) | -------------------------------------------------QRLAQAGAKIYIG-HAEEHI-EGASVVVVSSAIKDDNPELVTSKQKRIPVIQRAQMLAEIMRFRHGIAVAGTHGKTTTTAMISMIYTQAKLDPTFVNGGLVKSAGKNAHLGASRYLIAEADESDASFLHL-----------QPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVLMELVPKVGRQVITYGFSEQADYRIEDYEQTGFQGHYTVICPNNERINVLLNVPGKHNALNATAALAVAKEEGIANEAILEALADFQGAGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTRDLFDDFVQVLSQVDALIMLDVYAAGEAPIVGADSKSLCRSIRNLGKVDPILVSDTSQLGDVLDQIIQDGDLILAQGAGSVSKISRGLAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P31.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103831 for 2277 contacts (-45.6/contact) +
2D Compatibility (PS) -31259 + (NN) -7915 + (LL) 4212
1D Compatibility (HY) -14800 + (ID) 4200
Total energy: -157793.0 ( -69.30 by residue)
QMean score : 0.421
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